BioOntology MCP Server
A production-ready Model Context Protocol (MCP) server that provides comprehensive access to the BioOntology API for searching, annotating, and exploring over 1,200 biological ontologies.
Overview
What is BioOntology MCP Server?
BioOntology MCP Server is a production-ready Model Context Protocol (MCP) server that provides comprehensive access to the BioOntology API for searching, annotating, and exploring over 1,200 biological ontologies.
How to use BioOntology MCP Server?
To use the server, clone or download it, install the dependencies, and run the server with your BioOntology API key configured as an environment variable.
Key features of BioOntology MCP Server?
- Search across ontology terms with advanced filtering options.
- Annotate text and identify relevant ontology terms.
- Get detailed information about specific ontologies and classes.
- Access usage statistics and quality metrics for ontologies.
Use cases of BioOntology MCP Server?
- Searching for specific biological terms and their definitions.
- Annotating research papers with relevant ontology terms.
- Analyzing text data for ontology recommendations.
FAQ from BioOntology MCP Server?
- Can I use this server for all biological ontologies?
Yes! The server supports over 1,200 biological ontologies available in BioPortal.
- Is there a cost to use the BioOntology MCP Server?
No, the server is free to use, but you need a BioOntology API key.
- How do I get a BioOntology API key?
You can create an account at BioPortal and generate an API key from your account settings.
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