Liana-MCP
MCP server for cell–cell communication using liana
Overview
What is Liana-MCP?
Liana-MCP is a natural language interface designed for single-cell RNA sequencing (scRNA-Seq) analysis, enabling users to perform cell-cell communication analysis using Liana through the MCP framework.
How to use Liana-MCP?
To use Liana-MCP, install it via PyPI with the command pip install Liana-mcp, and run it locally or remotely as per the provided configuration instructions in your MCP client.
Key features of Liana-MCP?
- Input/output module for reading and writing scRNA-Seq data.
- Methods for analyzing cell-cell communication.
- Plotting capabilities including circle plots and dot plots.
Use cases of Liana-MCP?
- Performing scRNA-Seq analysis using natural language queries.
- Integrating Liana's functions into AI clients and agent frameworks.
- Visualizing cell cluster analysis results in various formats.
FAQ from Liana-MCP?
- Who can use Liana-MCP?
Anyone interested in scRNA-Seq analysis, including researchers and developers looking to integrate its functionalities into their applications.
- How do I run Liana-MCP?
You can run it locally or remotely by following the installation and configuration instructions provided in the documentation.
- Is Liana-MCP open for contributions?
Yes! Contributions to the code are welcome, and users can submit issues or contact the author for questions.
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