Proteinatlas MCP Server

Created By

Augmented-Nature5 months ago

A comprehensive Model Context Protocol (MCP) server for accessing Human Protein Atlas data, providing information about protein expression, subcellular localization, pathology, and more.

# proteinatlas

# mcp-server

Overview Content Tools Comments

Overview

What is Proteinatlas MCP Server?

The Proteinatlas MCP Server is a comprehensive Model Context Protocol (MCP) server designed for accessing Human Protein Atlas data, which provides detailed information about protein expression, subcellular localization, pathology, and more.

How to use Proteinatlas MCP Server?

To use the server, clone the repository, install the necessary dependencies, and run the server. You can then integrate it with your MCP client or use the command line to access various protein data.

Key features of Proteinatlas MCP Server?

Comprehensive protein search by name, gene symbol, or description.
Access to tissue-specific expression profiles and subcellular localization data.
Retrieval of cancer-related protein information and antibody validation data.
Batch processing capabilities for efficient lookup of multiple proteins.
Advanced search options with multiple filters.

Use cases of Proteinatlas MCP Server?

Researchers can find specific proteins related to diseases.
Biologists can analyze tissue-specific expression data for various proteins.
Cancer researchers can access pathology data for prognostic markers.
Developers can integrate protein data into applications using the MCP protocol.

FAQ from Proteinatlas MCP Server?

Can I access all protein data?
Yes, the server provides access to a wide range of protein data from the Human Protein Atlas.
Is there a limit on the number of proteins I can query?
Yes, batch queries can handle up to 100 proteins at a time.
What formats are available for data output?
Data can be retrieved in JSON, TSV, XML, and TRIG formats.

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